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SOX15 SRY-box transcription factor 15 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102822452, updated on 10-Mar-2024

Summary

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Gene symbol
SOX15
Gene description
SRY-box transcription factor 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408572.1 (9279245..9281007, complement)

NW_006408572.1Genomic Context describing neighboring genes Neighboring gene CD68 molecule Neighboring gene mannose-P-dolichol utilization defect 1 Neighboring gene FMR1 autosomal homolog 2 Neighboring gene spermidine/spermine N1-acetyltransferase family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408572 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SOX-15
Names
SRY-box 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408572.1 Reference ChrAsi1.0 Primary Assembly

    Range
    9279245..9281007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006863497.1 → XP_006863559.1  protein SOX-15

    UniProtKB/TrEMBL
    A0A9B0TLD5
    Conserved Domains (1) summary
    cd01388
    Location:48 → 119
    SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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