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ALDH16A1 aldehyde dehydrogenase 16 family member A1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102575096, updated on 8-May-2024

Summary

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Gene symbol
ALDH16A1
Gene description
aldehyde dehydrogenase 16 family member A1
See related
EnsemblRapid:ENSAMIG00015024972
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ALDH16A1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (39604082..39617192)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710236.1 (211219..224295, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene PIH1 domain containing 1 Neighboring gene uncharacterized LOC132250782 Neighboring gene fms related receptor tyrosine kinase 3 ligand Neighboring gene fms related receptor tyrosine kinase 3 ligand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase family 16 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    39604082..39617192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019488867.2 → XP_019344412.1  aldehyde dehydrogenase family 16 member A1 isoform X5

  2. XM_019488864.2 → XP_019344409.1  aldehyde dehydrogenase family 16 member A1 isoform X1

  3. XM_019488866.2 → XP_019344411.1  aldehyde dehydrogenase family 16 member A1 isoform X3

  4. XM_019488865.2 → XP_019344410.1  aldehyde dehydrogenase family 16 member A1 isoform X2

  5. XM_006274854.4 → XP_006274916.1  aldehyde dehydrogenase family 16 member A1 isoform X4

    Related
    ENSAMIP00015034599.1, ENSAMIT00015047337.1
    Conserved Domains (2) summary
    COG1012
    Location:549 → 787
    AdhE; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Energy production and conversion]
    cl11961
    Location:21 → 501
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

RNA

  1. XR_002090695.2 RNA Sequence

  2. XR_009462402.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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