U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCAS3 BCAS3 microtubule associated cell migration factor [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571560, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
BCAS3
Gene description
BCAS3 microtubule associated cell migration factor
Locus tag
Y1Q_0007193
See related
EnsemblRapid:ENSAMIG00015001187
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 14
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (4167218..4612929, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711418.1 (12809725..13256541)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 4 Neighboring gene uncharacterized LOC109284596 Neighboring gene uncharacterized LOC106738148 Neighboring gene T-box transcription factor 2 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1D Neighboring gene amyloid beta precursor protein binding protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
BCAS3 microtubule associated cell migration factor
Names
breast carcinoma-amplified sequence 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    4167218..4612929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019493311.2 → XP_019348856.1  BCAS3 microtubule associated cell migration factor isoform X1

  2. XM_014608078.3 → XP_014463564.1  BCAS3 microtubule associated cell migration factor isoform X5

    Related
    ENSAMIP00015001148.1, ENSAMIT00015001899.1
    Conserved Domains (3) summary
    pfam12490
    Location:517 → 734
    BCAS3; Breast carcinoma amplified sequence 3
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_014608076.3 → XP_014463562.1  BCAS3 microtubule associated cell migration factor isoform X2

    Related
    ENSAMIP00015001146.1, ENSAMIT00015001894.1
    Conserved Domains (3) summary
    pfam12490
    Location:517 → 734
    BCAS3; Breast carcinoma amplified sequence 3
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_019493313.2 → XP_019348858.1  BCAS3 microtubule associated cell migration factor isoform X3

    Related
    ENSAMIP00015001142.1, ENSAMIT00015001880.1

  5. XM_019493312.2 → XP_019348857.1  BCAS3 microtubule associated cell migration factor isoform X1

  6. XM_019493314.2 → XP_019348859.1  BCAS3 microtubule associated cell migration factor isoform X4

  7. XM_019493318.2 → XP_019348863.1  BCAS3 microtubule associated cell migration factor isoform X8

  8. XM_019493316.2 → XP_019348861.1  BCAS3 microtubule associated cell migration factor isoform X6

  9. XM_019493317.2 → XP_019348862.1  BCAS3 microtubule associated cell migration factor isoform X7

  10. XM_059717185.1 → XP_059573168.1  BCAS3 microtubule associated cell migration factor isoform X9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.