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ZFR2 zinc finger RNA binding protein 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102537391, updated on 10-Mar-2024

Summary

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Gene symbol
ZFR2
Gene description
zinc finger RNA binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
18
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 22 Unlocalized Scaffold NW_021964202.1 (24417506..24438841)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882762.1 (6737509..6758945)

NW_021964202.1Genomic Context describing neighboring genes Neighboring gene nicotinamide riboside kinase 2 Neighboring gene ATCAY kinesin light chain interacting caytaxin Neighboring gene uncharacterized LOC116285099 Neighboring gene megakaryocyte-associated tyrosine kinase Neighboring gene retina and anterior neural fold homeobox 2 Neighboring gene mitochondrial ribosomal protein L54

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger RNA-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964202.1 Reference VicPac3.1 Primary Assembly

    Range
    24417506..24438841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031689820.1 → XP_031545680.1  zinc finger RNA-binding protein 2

    UniProtKB/TrEMBL
    A0A6J3BF12
    Conserved Domains (5) summary
    smart00572
    Location:644 → 896
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00451
    Location:250 → 279
    ZnF_U1; U1-like zinc finger
    PRK07764
    Location:319 → 436
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    PRK12323
    Location:4 → 135
    PRK12323; DNA polymerase III subunit gamma/tau
    sd00020
    Location:252 → 274
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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