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JAG2 jagged canonical Notch ligand 2 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102514490, updated on 10-Mar-2024

Summary

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Gene symbol
JAG2
Gene description
jagged canonical Notch ligand 2
Locus tag
CB1_000096010
See related
EnsemblRapid:ENSCFEG00005003990
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
27
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 6 NC_045701.1 (93455078..93478814, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210272.1 (294241..311266, complement)

Chromosome 6 - NC_045701.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 132 Neighboring gene uncharacterized LOC106729162 Neighboring gene nudix hydrolase 14 Neighboring gene BRF1 RNA polymerase III transcription initiation factor subunit Neighboring gene BTB domain containing 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein jagged-2
Names
jagged 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045701.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    93455078..93478814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032482843.1 → XP_032338734.1  protein jagged-2 isoform X3

    UniProtKB/TrEMBL
    A0A8B8T952
    Conserved Domains (5) summary
    smart00179
    Location:420 → 455
    EGF_CA; Calcium-binding EGF-like domain
    smart00215
    Location:755 → 826
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:192 → 230
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:236 → 266
    EGF; EGF-like domain
    pfam01414
    Location:63 → 125
    DSL; Delta serrate ligand

  2. XM_032482842.1 → XP_032338733.1  protein jagged-2 isoform X2

    UniProtKB/TrEMBL
    A0A8B8TA19
    Related
    ENSCFEP00005006525.1, ENSCFET00005007405.1
    Conserved Domains (6) summary
    smart00179
    Location:497 → 532
    EGF_CA; Calcium-binding EGF-like domain
    smart00215
    Location:832 → 903
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:307 → 345
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:351 → 381
    EGF; EGF-like domain
    pfam01414
    Location:178 → 240
    DSL; Delta serrate ligand
    pfam07657
    Location:28 → 103
    MNNL; N-terminus of Notch ligand

  3. XM_032482841.1 → XP_032338732.1  protein jagged-2 isoform X1

    UniProtKB/TrEMBL
    A0A8B8T9H3
    Related
    ENSCFEP00005006489.1, ENSCFET00005007365.1
    Conserved Domains (6) summary
    smart00179
    Location:535 → 570
    EGF_CA; Calcium-binding EGF-like domain
    smart00215
    Location:870 → 941
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:307 → 345
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:351 → 381
    EGF; EGF-like domain
    pfam01414
    Location:178 → 240
    DSL; Delta serrate ligand
    pfam07657
    Location:28 → 103
    MNNL; N-terminus of Notch ligand
Nucleotide Protein
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