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ATP11B ATPase phospholipid transporting 11B (putative) [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102497224, updated on 10-Mar-2024

Summary

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Gene symbol
ATP11B
Gene description
ATPase phospholipid transporting 11B (putative)
Locus tag
TREES_T100020535
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159687.1 (2815841..2950637)

NW_006159687.1Genomic Context describing neighboring genes Neighboring gene lupus La protein-like Neighboring gene uncharacterized LOC102488067 Neighboring gene protein arginine N-methyltransferase 2 pseudogene Neighboring gene uncharacterized LOC114007636 Neighboring gene defective in cullin neddylation 1 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159687 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IF
Names
putative phospholipid-transporting ATPase IF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159687.1 Reference TupChi_1.0

    Range
    2815841..2950637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006147387.1 → XP_006147449.1  probable phospholipid-transporting ATPase IF

    Conserved Domains (6) summary
    TIGR01652
    Location:140 → 1207
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:197 → 281
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:595 → 706
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:122 → 190
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:948 → 1201
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cl21460
    Location:745 → 969
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

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