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MIDEAS mitotic deacetylase associated SANT domain protein [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102469336, updated on 10-Mar-2024

Summary

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Gene symbol
MIDEAS
Gene description
mitotic deacetylase associated SANT domain protein
Locus tag
TREES_T100010349
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Also known as
ELMSAN1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006208456.1 (1909089..1955134, complement)

NW_006208456.1Genomic Context describing neighboring genes Neighboring gene pumilio homolog 3 pseudogene Neighboring gene dynein axonemal light chain 1 Neighboring gene PNMA family member 1 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene prostaglandin reductase 2 Neighboring gene zinc finger protein 410

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006208456 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ELM2 and SANT domain-containing protein 1
Names
ELM2 and Myb/SANT domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006208456.1 Reference TupChi_1.0

    Range
    1909089..1955134 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014585017.2 → XP_014440503.1  ELM2 and SANT domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    L8Y4A9
    Conserved Domains (3) summary
    smart00717
    Location:832 → 871
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam01448
    Location:718 → 773
    ELM2; ELM2 domain
    cl21498
    Location:827 → 871
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

  2. XM_014585016.2 → XP_014440502.1  ELM2 and SANT domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    L8Y4A9
    Conserved Domains (3) summary
    smart00717
    Location:832 → 871
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam01448
    Location:718 → 773
    ELM2; ELM2 domain
    cl21498
    Location:827 → 871
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

RNA

  1. XR_001369848.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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