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CCNA1 cyclin A1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102450157, updated on 10-Mar-2024

Summary

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Gene symbol
CCNA1
Gene description
cyclin A1
See related
Ensembl:ENSPSIG00000002519
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854405.1 (1228336..1308904, complement)

NW_005854405.1Genomic Context describing neighboring genes Neighboring gene serine rich and transmembrane domain containing 1 Neighboring gene uncharacterized LOC112545369 Neighboring gene uncharacterized LOC102450402 Neighboring gene spartin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854405 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cell cycle phase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin A2-CDK2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854405.1 Reference PelSin_1.0 Primary Assembly

    Range
    1228336..1308904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025183323.1 → XP_025039108.1  cyclin-A1 isoform X1

    Conserved Domains (3) summary
    pfam00134
    Location:229 → 355
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:357 → 474
    Cyclin_C; Cyclin, C-terminal domain
    cl25647
    Location:92 → 205
    Cyclin_N2; N-terminal region of cyclin_N

  2. XM_025183325.1 → XP_025039110.1  cyclin-A1 isoform X4

    UniProtKB/TrEMBL
    K7F3F8
    Conserved Domains (3) summary
    pfam00134
    Location:165 → 291
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:293 → 410
    Cyclin_C; Cyclin, C-terminal domain
    cl25647
    Location:28 → 141
    Cyclin_N2; N-terminal region of cyclin_N

  3. XM_025183327.1 → XP_025039112.1  cyclin-A1 isoform X4

    UniProtKB/TrEMBL
    K7F3F8
    Related
    ENSPSIP00000002568.1, ENSPSIT00000002577.1
    Conserved Domains (3) summary
    pfam00134
    Location:165 → 291
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:293 → 410
    Cyclin_C; Cyclin, C-terminal domain
    cl25647
    Location:28 → 141
    Cyclin_N2; N-terminal region of cyclin_N

  4. XM_025183324.1 → XP_025039109.1  cyclin-A1 isoform X2

    Conserved Domains (3) summary
    pfam00134
    Location:198 → 324
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:326 → 443
    Cyclin_C; Cyclin, C-terminal domain
    cl25647
    Location:61 → 174
    Cyclin_N2; N-terminal region of cyclin_N

  5. XM_006120544.3 → XP_006120606.1  cyclin-A1 isoform X3

    Conserved Domains (3) summary
    pfam00134
    Location:182 → 308
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:310 → 427
    Cyclin_C; Cyclin, C-terminal domain
    pfam16500
    Location:45 → 158
    Cyclin_N2; N-terminal region of cyclin_N
Nucleotide Protein
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