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PGP phosphoglycolate phosphatase [ Bubalus bubalis (water buffalo) ]

Gene ID: 102403860, updated on 10-Mar-2024

Summary

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Gene symbol
PGP
Gene description
phosphoglycolate phosphatase
See related
EnsemblRapid:ENSBALG00030012433
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PGP in Genome Data Viewer
Location:
chromosome: 24
Exon count:
2
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 24 NC_059180.1 (40447533..40450354)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 24 NC_058366.1 (40154135..40156956)

Chromosome 24 - NC_059180.1Genomic Context describing neighboring genes Neighboring gene enoyl-CoA delta isomerase 1 Neighboring gene deoxyribonuclease 1 like 2 Neighboring gene E4F transcription factor 1 Neighboring gene BRICHOS domain containing 5 Neighboring gene MTOR associated protein, LST8 homolog Neighboring gene CASK interacting protein 1 Neighboring gene uncharacterized LOC123331614

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059180.1 Reference NDDB_SH_1 Primary Assembly

    Range
    40447533..40450354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025274993.3 → XP_025130778.1  glycerol-3-phosphate phosphatase

    Related
    ENSBALP00030023446.1, ENSBALT00030034705.1
    Conserved Domains (1) summary
    cd07510
    Location:28 → 319
    HAD_Pase_UmpH-like; UmpH/NagD family phosphatase, similar to human PGP phosphoglycolate phosphatase and Schizosaccharomyces pombe PHO2 p-nitrophenylphosphatase
Nucleotide Protein
Heading Accession and Version

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