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NOP10 NOP10 ribonucleoprotein [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102381317, updated on 10-Mar-2024

Summary

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Gene symbol
NOP10
Gene description
NOP10 ribonucleoprotein
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842295.1 (35649..36764, complement)

NW_005842295.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 12 member 6 Neighboring gene ER membrane protein complex subunit 4 Neighboring gene NUT midline carcinoma family member 1 Neighboring gene lysophosphatidylcholine acyltransferase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842295 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables box H/ACA snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomerase RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of telomerase RNA localization to Cajal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of box H/ACA snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of box H/ACA telomerase RNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
H/ACA ribonucleoprotein complex subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842295.1 Reference ASM45574v1 Primary Assembly

    Range
    35649..36764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006028192.2 → XP_006028254.1  H/ACA ribonucleoprotein complex subunit 3

    See identical proteins and their annotated locations for XP_006028254.1

    UniProtKB/TrEMBL
    A0A1U7SCT9
    Conserved Domains (1) summary
    pfam04135
    Location:6 → 52
    Nop10p; Nucleolar RNA-binding protein, Nop10p family
Nucleotide Protein
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