U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rnf216 ring finger protein 216 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102303009, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
rnf216
Gene description
ring finger protein 216
See related
Ensembl:ENSHBUG00000013829
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rnf216 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582825.1 (221926..241683)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179884.1 (221619..241357)

NW_024582825.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium-binding domain-containing protein 1-like Neighboring gene SMAD specific E3 ubiquitin protein ligase 1 Neighboring gene fascin actin-bundling protein 1a Neighboring gene actin, beta 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase RNF216

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582825.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    221926..241683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005946205.3 → XP_005946267.1  E3 ubiquitin-protein ligase RNF216

    UniProtKB/TrEMBL
    A0A3Q2VK01
    Related
    ENSHBUP00000012142.1
    Conserved Domains (3) summary
    pfam05109
    Location:107 → 293
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd16630
    Location:735 → 791
    RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
    pfam01485
    Location:884 → 928
    IBR; IBR domain, a half RING-finger domain

  2. XM_042213653.1 → XP_042069587.1  E3 ubiquitin-protein ligase RNF216

    UniProtKB/TrEMBL
    A0A3Q2VK01
    Conserved Domains (3) summary
    pfam05109
    Location:107 → 293
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd16630
    Location:735 → 791
    RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
    pfam01485
    Location:884 → 928
    IBR; IBR domain, a half RING-finger domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.