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S100A4 S100 calcium binding protein A4 [ Bos mutus (wild yak) ]

Gene ID: 102276537, updated on 10-Mar-2024

Summary

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Gene symbol
S100A4
Gene description
S100 calcium binding protein A4
Locus tag
M91_03026
See related
Ensembl:ENSBMUG00000026788
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005396384.1 (47653..51126, complement)

NW_005396384.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A6 Neighboring gene S100 calcium binding protein A5 Neighboring gene S100 calcium binding protein A3 Neighboring gene S100 calcium binding protein A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005396384.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RAGE receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transition metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-A4
Names
Protein S100-A4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005396384.1 Reference BosGru_v2.0 Primary Assembly

    Range
    47653..51126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005910007.2 → XP_005910069.1  protein S100-A4

    See identical proteins and their annotated locations for XP_005910069.1

    UniProtKB/TrEMBL
    L8HPQ3
    Related
    ENSBMUP00000036063.1, ENSBMUT00000041459.1
    Conserved Domains (1) summary
    cd00213
    Location:4 → 90
    S-100; S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 ...
Nucleotide Protein
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