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PACSIN3 protein kinase C and casein kinase substrate in neurons 3 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102255095, updated on 30-Mar-2024

Summary

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Gene symbol
PACSIN3
Gene description
protein kinase C and casein kinase substrate in neurons 3
Locus tag
D623_10025519
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005362439.1 (3437441..3448541, complement)

NW_005362439.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 4 Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene ARF GTPase activating protein 2 Neighboring gene damage specific DNA binding protein 2 Neighboring gene acid phosphatase 2, lysosomal Neighboring gene nuclear receptor subfamily 1 group H member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005362439.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C and casein kinase substrate in neurons protein 3
Names
Protein kinase C and casein kinase substrate in neurons protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005362439.1 Reference ASM41265v1

    Range
    3437441..3448541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005870806.2 → XP_005870868.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

    See identical proteins and their annotated locations for XP_005870868.1

    UniProtKB/TrEMBL
    S7N3B9
    Conserved Domains (2) summary
    cd11997
    Location:365 → 420
    SH3_PACSIN3; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3)
    cl12013
    Location:16 → 273
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_014543380.1 → XP_014398866.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

    UniProtKB/TrEMBL
    S7N3B9
    Conserved Domains (2) summary
    cd11997
    Location:365 → 420
    SH3_PACSIN3; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3)
    cl12013
    Location:16 → 273
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  3. XM_014543382.1 → XP_014398868.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X3

    Conserved Domains (2) summary
    cl12013
    Location:16 → 260
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl17036
    Location:279 → 334
    SH3; Src Homology 3 domain superfamily

  4. XM_014543381.1 → XP_014398867.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X2

    Conserved Domains (2) summary
    cd11997
    Location:364 → 419
    SH3_PACSIN3; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3)
    cl12013
    Location:16 → 273
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  5. XM_014543379.1 → XP_014398865.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

    UniProtKB/TrEMBL
    S7N3B9
    Conserved Domains (2) summary
    cd11997
    Location:365 → 420
    SH3_PACSIN3; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3)
    cl12013
    Location:16 → 273
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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