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GPC1 glypican 1 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102244763, updated on 30-Mar-2024

Summary

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Gene symbol
GPC1
Gene description
glypican 1
Locus tag
D623_10035106
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Glypican-1
Orthologs
human mouse all
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Genomic context

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See GPC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005353838.1 (15022740..15033586, complement)

NW_005353838.1Genomic Context describing neighboring genes Neighboring gene arginyl aminopeptidase like 1 Neighboring gene ankyrin repeat and MYND domain containing 1 Neighboring gene uncharacterized LOC106727729 Neighboring gene otospiralin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005353838.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005353838.1 Reference ASM41265v1

    Range
    15022740..15033586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005857705.2 → XP_005857767.1  glypican-1 isoform X1

    UniProtKB/TrEMBL
    S7MDS1
    Conserved Domains (1) summary
    pfam01153
    Location:21 → 503
    Glypican; Glypican

  2. XM_005857706.2 → XP_005857768.1  glypican-1 isoform X2

    UniProtKB/TrEMBL
    S7MDS1
    Conserved Domains (1) summary
    pfam01153
    Location:1 → 466
    Glypican; Glypican
Nucleotide Protein
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