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UPK1B uroplakin 1B [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102242781, updated on 30-Mar-2024

Summary

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Gene symbol
UPK1B
Gene description
uroplakin 1B
Locus tag
D623_10031777
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005367587.1 (4896372..4928662)

NW_005367587.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily member 11 Neighboring gene testis expressed 55 Neighboring gene F-box/WD repeat-containing protein 11-like Neighboring gene beta-1,4-galactosyltransferase 4 Neighboring gene Rho GTPase activating protein 31 Neighboring gene methylosome subunit pICln pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005367587.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroplakin-1b
Names
Uroplakin-1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005367587.1 Reference ASM41265v1

    Range
    4896372..4928662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005875325.2 → XP_005875387.1  uroplakin-1b

    See identical proteins and their annotated locations for XP_005875387.1

    UniProtKB/TrEMBL
    S7N850
    Conserved Domains (2) summary
    cd03156
    Location:118 → 230
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 258
    Tetraspannin; Tetraspanin family

  2. XM_005875324.2 → XP_005875386.1  uroplakin-1b

    See identical proteins and their annotated locations for XP_005875386.1

    UniProtKB/TrEMBL
    S7N850
    Conserved Domains (2) summary
    cd03156
    Location:118 → 230
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 258
    Tetraspannin; Tetraspanin family

  3. XM_005875326.2 → XP_005875388.1  uroplakin-1b

    See identical proteins and their annotated locations for XP_005875388.1

    UniProtKB/TrEMBL
    S7N850
    Conserved Domains (2) summary
    cd03156
    Location:118 → 230
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 258
    Tetraspannin; Tetraspanin family
Nucleotide Protein
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