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MARCHF2 membrane associated ring-CH-type finger 2 [ Columba livia (rock pigeon) ]

Gene ID: 102098740, updated on 3-Aug-2024

Summary

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Gene symbol
MARCHF2
Gene description
membrane associated ring-CH-type finger 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Also known as
MARCH2
Orthologs
human mouse all
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Genomic context

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See MARCHF2 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 27 NC_088628.1 (3966144..4009508, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973891.1 (112307..144576)

Chromosome 27 - NC_088628.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102084495 Neighboring gene uncharacterized LOC102084314 Neighboring gene thaicobrin Neighboring gene RAB11B, member RAS oncogene family Neighboring gene angiopoietin like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCHF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088628.1 Reference bColLiv1.pat.W.v2

    Range
    3966144..4009508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065042359.1 → XP_064898431.1  E3 ubiquitin-protein ligase MARCHF2

    UniProtKB/TrEMBL
    R7VSN0

  2. XM_065042360.1 → XP_064898432.1  E3 ubiquitin-protein ligase MARCHF2

    UniProtKB/TrEMBL
    R7VSN0

  3. XM_021280644.2 → XP_021136319.1  E3 ubiquitin-protein ligase MARCHF2

    UniProtKB/TrEMBL
    R7VSN0
    Conserved Domains (1) summary
    cd16808
    Location:62 → 113
    RING_CH-C4HC3_MARCH2; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH2 (MARCH2)

RNA

  1. XR_010468259.1 RNA Sequence

  2. XR_010468258.1 RNA Sequence

  3. XR_010468261.1 RNA Sequence

  4. XR_010468260.1 RNA Sequence

  5. XR_010468262.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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