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RFX8 regulatory factor X8 [ Columba livia (rock pigeon) ]

Gene ID: 102086221, updated on 3-Aug-2024

Summary

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Gene symbol
RFX8
Gene description
regulatory factor X8
Locus tag
A306_03204
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 1 NC_088602.1 (68449014..68482821)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973330.1 (1572172..1610264)

Chromosome 1 - NC_088602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135579354 Neighboring gene interleukin 1 receptor type 2 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 4 Neighboring gene cellular repressor of E1A stimulated genes 2 Neighboring gene small nucleolar RNA SNORD89 Neighboring gene ring finger protein 149

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein RFX8
Names
RFX family member 8, lacking RFX DNA binding domain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088602.1 Reference bColLiv1.pat.W.v2

    Range
    68449014..68482821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065061079.1 → XP_064917151.1  DNA-binding protein RFX8 isoform X3

    UniProtKB/TrEMBL
    A0A2I0MSY8

  2. XM_065061069.1 → XP_064917141.1  DNA-binding protein RFX8 isoform X2

    UniProtKB/TrEMBL
    A0A2I0MSY8

  3. XM_065061059.1 → XP_064917131.1  DNA-binding protein RFX8 isoform X1

    UniProtKB/TrEMBL
    A0A2I0MSY8
Nucleotide Protein
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