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MRPS18C mitochondrial ribosomal protein S18C [ Columba livia (rock pigeon) ]

Gene ID: 102084804, updated on 3-Aug-2024

Summary

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Gene symbol
MRPS18C
Gene description
mitochondrial ribosomal protein S18C
Locus tag
A306_12444
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See MRPS18C in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 4 NC_088605.1 (54871418..54874333)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973785.1 (55853..58776)

Chromosome 4 - NC_088605.1Genomic Context describing neighboring genes Neighboring gene heparanase Neighboring gene helicase, POLQ like Neighboring gene abraxas 1, BRCA1 A complex subunit Neighboring gene glycerol-3-phosphate acyltransferase 3 Neighboring gene glycerol-3-phosphate acyltransferase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein bS18m
Names
28S ribosomal protein S18c, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088605.1 Reference bColLiv1.pat.W.v2

    Range
    54871418..54874333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005512407.3 → XP_005512464.1  small ribosomal subunit protein bS18m

    UniProtKB/TrEMBL
    A0A2I0MGP7
    Conserved Domains (1) summary
    pfam01084
    Location:58 → 108
    Ribosomal_S18; Ribosomal protein S18
Nucleotide Protein
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