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SYT7 synaptotagmin 7 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102037227, updated on 3-Aug-2024

Summary

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Gene symbol
SYT7
Gene description
synaptotagmin 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054416.1 (2358820..2377005)

NW_005054416.1Genomic Context describing neighboring genes Neighboring gene myelin regulatory factor Neighboring gene diacylglycerol lipase alpha Neighboring gene uncharacterized LOC115948506 Neighboring gene uncharacterized LOC115948505 Neighboring gene succinate dehydrogenase complex assembly factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054416 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: synaptotagmin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054416.1 Reference GeoFor_1.0

    Range
    2358820..2377005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031061518.1 → XP_030917378.1  LOW QUALITY PROTEIN: synaptotagmin-7

    UniProtKB/TrEMBL
    A0A8N5I182
    Conserved Domains (2) summary
    cd08386
    Location:366 → 490
    C2A_Synaptotagmin-7; C2A domain first repeat present in Synaptotagmin 7
    cl14603
    Location:498 → 601
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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