U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cnot6l CCR4-NOT transcription complex subunit 6 like [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102017907, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Cnot6l
Gene description
CCR4-NOT transcription complex subunit 6 like
See related
Ensembl:ENSCLAG00000004598
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955433.1 (2206462..2290773, complement)

NW_004955433.1Genomic Context describing neighboring genes Neighboring gene DNA/RNA-binding protein KIN17-like Neighboring gene C-X-C motif chemokine ligand 13 Neighboring gene uncharacterized LOC106148947 Neighboring gene mitochondrial ribosomal protein L1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004955433.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CCR4-NOT transcription complex subunit 6-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955433.1 Reference ChiLan1.0 Primary Assembly

    Range
    2206462..2290773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005388195.2 → XP_005388252.1  CCR4-NOT transcription complex subunit 6-like

    UniProtKB/TrEMBL
    A0A8C2YL24
    Related
    ENSCLAP00000006526.1, ENSCLAT00000006634.1
    Conserved Domains (4) summary
    cd10312
    Location:186 → 533
    Deadenylase_CCR4b; C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like
    sd00031
    Location:33 → 52
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:51 → 91
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:51 → 109
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.