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Marchf8 membrane associated ring-CH-type finger 8 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 102001026, updated on 10-Mar-2024

Summary

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Gene symbol
Marchf8
Gene description
membrane associated ring-CH-type finger 8
See related
Ensembl:ENSMOCG00000002394
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Also known as
March8
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) Unplaced Scaffold NW_004949099.1 (30364193..30446194)

NW_004949099.1Genomic Context describing neighboring genes Neighboring gene WASH complex subunit 2C Neighboring gene zinc finger AN1-type containing 4 Neighboring gene arachidonate 5-lipoxygenase Neighboring gene olfactory receptor 6C4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004949099 Unplaced Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949099.1 Reference MicOch1.0

    Range
    30364193..30446194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013353044.2 → XP_013208498.1  E3 ubiquitin-protein ligase MARCH8 isoform X1

    UniProtKB/TrEMBL
    A0A8J6GZB9
    Conserved Domains (1) summary
    cd16698
    Location:359 → 410
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins

  2. XM_026788150.1 → XP_026643951.1  E3 ubiquitin-protein ligase MARCH8 isoform X1

    UniProtKB/TrEMBL
    A0A8J6GZB9

  3. XM_005365064.3 → XP_005365121.1  E3 ubiquitin-protein ligase MARCH8 isoform X3

    Related
    ENSMOCP00000003008.1, ENSMOCT00000003211.1
    Conserved Domains (1) summary
    smart00744
    Location:77 → 125
    RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins

  4. XM_026788151.1 → XP_026643952.1  E3 ubiquitin-protein ligase MARCH8 isoform X2

    UniProtKB/TrEMBL
    A0A8J6GZB9
    Conserved Domains (1) summary
    cd16698
    Location:318 → 369
    RING_CH-C4HC3_MARCH1_like; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING finger protein MARCH1, MARCH8, and similar proteins

RNA

  1. XR_003378480.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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