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Mgat4c MGAT4 family member C [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101970342, updated on 8-Mar-2024

Summary

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Gene symbol
Mgat4c
Gene description
MGAT4 family member C
Locus tag
H1C71_012645
See related
EnsemblRapid:ENSSTOG00015001253
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (32395087..32829837)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936507.1 (3410481..3476061, complement)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120888610 Neighboring gene uncharacterized LOC120888241 Neighboring gene Ras association domain family member 9 Neighboring gene neurotensin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Names
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    32395087..32829837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040280219.1 → XP_040136153.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_040280229.1 → XP_040136163.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_040280215.1 → XP_040136149.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  4. XM_040280236.1 → XP_040136170.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  5. XM_021725788.2 → XP_021581463.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  6. XM_040280237.1 → XP_040136171.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  7. XM_040280211.1 → XP_040136145.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

  8. XM_040280212.1 → XP_040136146.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  9. XM_040280233.1 → XP_040136167.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X3

    UniProtKB/TrEMBL
    I3ND32
    Related
    ENSSTOP00015001523.1, ENSSTOT00015001682.1
    Conserved Domains (1) summary
    pfam04666
    Location:64 → 326
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
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