U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ccn1 cellular communication network factor 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962982, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Ccn1
Gene description
cellular communication network factor 1
Locus tag
H1C71_034066
See related
EnsemblRapid:ENSSTOG00015002847
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Also known as
Cyr61
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405058.1 (96150919..96153859)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936608.1 (152174..155123, complement)

NW_024405058.1Genomic Context describing neighboring genes Neighboring gene BCL10 immune signaling adaptor Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene zinc finger HIT-type containing 6 Neighboring gene FMR1 autosomal homolog 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CCN family member 1
Names
cysteine rich angiogenic inducer 61

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405058.1 Reference HiC_Itri_2 Primary Assembly

    Range
    96150919..96153859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005334064.3 → XP_005334121.1  CCN family member 1

    UniProtKB/TrEMBL
    I3MX10
    Related
    ENSSTOP00015003455.1, ENSSTOT00015003845.1
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:294 → 375
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.