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SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [ Chrysemys picta (Painted turtle) ]

Gene ID: 101949676, updated on 8-Mar-2024

Summary

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Gene symbol
SUGT1
Gene description
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
See related
Ensembl:ENSCPBG00000007923
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885841.1 (4101592..4145213, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 1 NC_024218.1 (50828013..50871125, complement)

NW_024885841.1Genomic Context describing neighboring genes Neighboring gene protocadherin-8 Neighboring gene chondromodulin Neighboring gene E74 like ETS transcription factor 1 Neighboring gene WW domain binding protein 4 Neighboring gene mitochondrial translation release factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SGT1 homolog
Names
suppressor of G2 allele of SKP1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885841.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    4101592..4145213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042842679.1 → XP_042698613.1  protein SGT1 homolog isoform X2

    Conserved Domains (1) summary
    PLN03088
    Location:2 → 259
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional

  2. XM_008168650.3 → XP_008166872.1  protein SGT1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C3FLP3
    Related
    ENSCPBP00000010290.1
    Conserved Domains (5) summary
    cd06489
    Location:142 → 225
    p23_CS_hSgt1_like; p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the ...
    PLN03088
    Location:17 → 332
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:38 → 68
    TPR; TPR repeat [structural motif]
    pfam05002
    Location:252 → 332
    SGS; SGS domain
    pfam07719
    Location:39 → 72
    TPR_2; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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