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LGMN legumain [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867471, updated on 1-Aug-2024

Summary

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Gene symbol
LGMN
Gene description
legumain
See related
Ensembl:ENSMFAG00000044255
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
PRSC1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 7 NC_088381.1 (160711786..160755183, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 7 NC_052261.1 (152760694..152804346, complement)

Chromosome 7 - NC_088381.1Genomic Context describing neighboring genes Neighboring gene Ras and Rab interactor 3 Neighboring gene uncharacterized LOC135972041 Neighboring gene uncharacterized LOC123574630 Neighboring gene golgin A5 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
legumain
Names
Asparaginyl endopeptidase
Protease, cysteine 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088381.1 Reference T2T-MFA8v1.0

    Range
    160711786..160755183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005562054.4 → XP_005562111.1  legumain

    See identical proteins and their annotated locations for XP_005562111.1

    UniProtKB/Swiss-Prot
    Q4R4T8
    UniProtKB/TrEMBL
    A0A2K5VLX2, A0A2K5VM53, A0A8J8Y362
    Related
    ENSMFAP00000025772.1
    Conserved Domains (1) summary
    pfam01650
    Location:29 → 285
    Peptidase_C13; Peptidase C13 family

  2. XM_065549267.1 → XP_065405339.1  legumain

    UniProtKB/Swiss-Prot
    Q4R4T8
    UniProtKB/TrEMBL
    A0A2K5VLX2, A0A2K5VM53, A0A8J8Y362
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4R4T8.1 GenPept UniProtKB/Swiss-Prot:Q4R4T8

Gene LinkOut

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