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Rita1 RBPJ interacting and tubulin associated 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101841287, updated on 8-Mar-2024

Summary

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Gene symbol
Rita1
Gene description
RBPJ interacting and tubulin associated 1
See related
EnsemblRapid:ENSMAUG00000039164
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429206.1 (11778058..11792610, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801691.1 (9014739..9017937, complement)

NW_024429206.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 8 member B1 Neighboring gene two pore segment channel 1 Neighboring gene IQ motif containing D Neighboring gene DEAD-box helicase 54 Neighboring gene cilia and flagella associated protein 73 Neighboring gene RAS protein activator like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear export IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RBPJ-interacting and tubulin-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429206.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    11778058..11792610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040731113.1 → XP_040587047.1  RBPJ-interacting and tubulin-associated protein 1

    UniProtKB/TrEMBL
    A0A1U7QR22
    Related
    ENSMAUP00000057169.1, ENSMAUT00000078885.1
    Conserved Domains (1) summary
    pfam17066
    Location:1 → 258
    RITA; RBPJ-interacting and tubulin associated protein

  2. XM_040731112.1 → XP_040587046.1  RBPJ-interacting and tubulin-associated protein 1

    UniProtKB/TrEMBL
    A0A1U7QR22
    Conserved Domains (1) summary
    pfam17066
    Location:1 → 258
    RITA; RBPJ-interacting and tubulin associated protein

  3. XM_013119710.3 → XP_012975164.1  RBPJ-interacting and tubulin-associated protein 1

    See identical proteins and their annotated locations for XP_012975164.1

    UniProtKB/TrEMBL
    A0A1U7QR22
    Conserved Domains (1) summary
    pfam17066
    Location:1 → 258
    RITA; RBPJ-interacting and tubulin associated protein
Nucleotide Protein
Heading Accession and Version

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