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Cage1 cancer antigen 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101840332, updated on 8-Mar-2024

Summary

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Gene symbol
Cage1
Gene description
cancer antigen 1
See related
EnsemblRapid:ENSMAUG00000000989
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Cage1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429196.1 (58949037..58982706, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801610.1 (15125279..15158797)

NW_024429196.1Genomic Context describing neighboring genes Neighboring gene ras responsive element binding protein 1 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene U1 spliceosomal RNA Neighboring gene signal sequence receptor subunit 1 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene RIO kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cancer-associated gene 1 protein
Names
cancer-associated gene 1 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429196.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    58949037..58982706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040755844.1 → XP_040611778.1  cancer-associated gene 1 protein isoform X5

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Conserved Domains (1) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_040755841.1 → XP_040611775.1  cancer-associated gene 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Related
    ENSMAUP00000001333.2, ENSMAUT00000001368.2
    Conserved Domains (2) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:616 → 771
    COG5022; Myosin heavy chain [General function prediction only]

  3. XM_040755843.1 → XP_040611777.1  cancer-associated gene 1 protein isoform X4

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Related
    ENSMAUP00000001354.2, ENSMAUT00000001389.2
    Conserved Domains (1) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_040755840.1 → XP_040611774.1  cancer-associated gene 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Related
    ENSMAUP00000052220.1, ENSMAUT00000062889.1
    Conserved Domains (1) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_040755847.1 → XP_040611781.1  cancer-associated gene 1 protein isoform X8

    Conserved Domains (1) summary
    COG1196
    Location:260 → 613
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  6. XM_040755846.1 → XP_040611780.1  cancer-associated gene 1 protein isoform X7

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Conserved Domains (1) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_040755845.1 → XP_040611779.1  cancer-associated gene 1 protein isoform X6

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Conserved Domains (2) summary
    COG1196
    Location:262 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:388 → 719
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  8. XM_040755848.1 → XP_040611782.1  cancer-associated gene 1 protein isoform X9

    Conserved Domains (1) summary
    COG1196
    Location:260 → 592
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  9. XM_040755842.1 → XP_040611776.1  cancer-associated gene 1 protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q0CIK6
    Conserved Domains (1) summary
    COG1196
    Location:230 → 508
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein Strain
Heading Accession and Version

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