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PACRG parkin coregulated [ Anas platyrhynchos (mallard) ]

Gene ID: 101801869, updated on 8-Mar-2024

Summary

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Gene symbol
PACRG
Gene description
parkin coregulated
Locus tag
Anapl_12548
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 3 NC_051774.1 (47351100..47568984, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 3 NC_040048.1 (46489955..46715723, complement)

Chromosome 3 - NC_051774.1Genomic Context describing neighboring genes Neighboring gene QKI, KH domain containing RNA binding Neighboring gene uncharacterized LOC106018736 Neighboring gene uncharacterized LOC113843199 Neighboring gene uncharacterized LOC110353697 Neighboring gene uncharacterized LOC106018737 Neighboring gene uncharacterized LOC119716557 Neighboring gene uncharacterized LOC110353696 Neighboring gene parkin RBR E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC119716558

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp90 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
parkin coregulated gene protein
Names
PARK2 coregulated
parkin coregulated gene protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051774.1 Reference ZJU1.0 Primary Assembly

    Range
    47351100..47568984 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027454268.2 → XP_027310069.1  parkin coregulated gene protein isoform X2

    UniProtKB/TrEMBL
    A0A8B9TSQ8

  2. XM_027454267.2 → XP_027310068.2  parkin coregulated gene protein isoform X1

    UniProtKB/TrEMBL
    A0A8B9TSQ8, U3IRW0
    Conserved Domains (1) summary
    pfam10274
    Location:67 → 250
    ParcG; Parkin co-regulated protein
Nucleotide Protein
Heading Accession and Version

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