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Got1 glutamic-oxaloacetic transaminase 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101713030, updated on 8-Mar-2024

Summary

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Gene symbol
Got1
Gene description
glutamic-oxaloacetic transaminase 1
Locus tag
GW7_18503
See related
Ensembl:ENSHGLG00000010094
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Got1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624737.1 (11114818..11153209, complement)

NW_004624737.1Genomic Context describing neighboring genes Neighboring gene heparanase 2 (inactive) Neighboring gene akirin-1 pseudogene Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 1 Neighboring gene proline-rich protein 13 pseudogene Neighboring gene uncharacterized LOC110347848

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624737 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate aminotransferase, cytoplasmic
Names
Aspartate aminotransferase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624737.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    11114818..11153209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004838646.3 → XP_004838703.1  aspartate aminotransferase, cytoplasmic

    See identical proteins and their annotated locations for XP_004838703.1

    UniProtKB/TrEMBL
    G5C4U7
    Related
    ENSHGLP00000014133.1, ENSHGLT00000014276.1
    Conserved Domains (2) summary
    PTZ00376
    Location:5 → 412
    PTZ00376; aspartate aminotransferase; Provisional
    pfam00155
    Location:31 → 405
    Aminotran_1_2; Aminotransferase class I and II
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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