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Zbtb17 zinc finger and BTB domain containing 17 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101710815, updated on 8-Mar-2024

Summary

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Gene symbol
Zbtb17
Gene description
zinc finger and BTB domain containing 17
Locus tag
GW7_15520
See related
Ensembl:ENSHGLG00000011895
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624764.1 (2144555..2174177, complement)

NW_004624764.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain-containing family M member 2 Neighboring gene spen family transcriptional repressor Neighboring gene translation machinery-associated protein 16 pseudogene Neighboring gene steroid receptor associated and regulated protein Neighboring gene heat shock protein family B (small) member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624764 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 17
Names
Zinc finger and BTB domain-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624764.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    2144555..2174177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021262859.1 → XP_021118518.1  zinc finger and BTB domain-containing protein 17 isoform X1

    UniProtKB/TrEMBL
    G5BRT8
    Conserved Domains (5) summary
    COG5048
    Location:297 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:614 → 633
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl00478
    Location:126 → 274
    LGT; Prolipoprotein diacylglyceryl transferase

  2. XM_021262861.1 → XP_021118520.1  zinc finger and BTB domain-containing protein 17 isoform X2

    UniProtKB/TrEMBL
    G5BRT8
    Related
    ENSHGLP00000016629.1, ENSHGLT00000016799.1
    Conserved Domains (5) summary
    COG5048
    Location:297 → 628
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:607 → 626
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl00478
    Location:126 → 274
    LGT; Prolipoprotein diacylglyceryl transferase

  3. XM_021262860.1 → XP_021118519.1  zinc finger and BTB domain-containing protein 17 isoform X1

    UniProtKB/TrEMBL
    G5BRT8
    Conserved Domains (5) summary
    COG5048
    Location:297 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:614 → 633
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl00478
    Location:126 → 274
    LGT; Prolipoprotein diacylglyceryl transferase

  4. XM_021262863.1 → XP_021118522.1  zinc finger and BTB domain-containing protein 17 isoform X5

    UniProtKB/TrEMBL
    G5BRT8
    Conserved Domains (5) summary
    smart00225
    Location:1 → 33
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:221 → 555
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:391 → 411
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:538 → 557
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl00478
    Location:50 → 198
    LGT; Prolipoprotein diacylglyceryl transferase

  5. XM_021262862.1 → XP_021118521.1  zinc finger and BTB domain-containing protein 17 isoform X3

    UniProtKB/TrEMBL
    G5BRT8
    Conserved Domains (5) summary
    COG5048
    Location:297 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:614 → 633
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl00478
    Location:126 → 274
    LGT; Prolipoprotein diacylglyceryl transferase

  6. XM_004850353.3 → XP_004850410.1  zinc finger and BTB domain-containing protein 17 isoform X4

    See identical proteins and their annotated locations for XP_004850410.1

    UniProtKB/TrEMBL
    G5BRT8
    Related
    ENSHGLP00000016630.1, ENSHGLT00000016800.1
    Conserved Domains (8) summary
    smart00225
    Location:25 → 109
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:297 → 628
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:607 → 626
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:297 → 319
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    pfam06614
    Location:126 → 275
    Neuromodulin; Neuromodulin
    pfam13465
    Location:311 → 335
    zf-H2C2_2; Zinc-finger double domain

  7. XM_013074263.1 → XP_012929717.1  zinc finger and BTB domain-containing protein 17 isoform X6

    UniProtKB/TrEMBL
    G5BRT8
    Conserved Domains (5) summary
    COG5048
    Location:213 → 544
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:523 → 542
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:213 → 235
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:227 → 251
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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