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Hdac10 histone deacetylase 10 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101706833, updated on 8-Mar-2024

Summary

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Gene symbol
Hdac10
Gene description
histone deacetylase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624752.1 (518563..524497)

NW_004624752.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 11 Neighboring gene mitogen-activated protein kinase 12 Neighboring gene tubulin gamma complex component 6 Neighboring gene uncharacterized LOC110349338 Neighboring gene selenoprotein O

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624752 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624752.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    518563..524497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004845335.3 → XP_004845392.1  histone deacetylase 10 isoform X2

    Conserved Domains (2) summary
    cl00262
    Location:491 → 548
    TroA-like; Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between ...
    cl17011
    Location:18 → 302
    Arginase_HDAC; Arginase-like and histone-like hydrolases

  2. XM_004845332.3 → XP_004845389.1  histone deacetylase 10 isoform X1

    UniProtKB/TrEMBL
    G5B2I1
    Conserved Domains (1) summary
    cl17011
    Location:18 → 354
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Nucleotide Protein
Heading Accession and Version

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