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NFYC nuclear transcription factor Y subunit gamma [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101664235, updated on 8-Mar-2024

Summary

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Gene symbol
NFYC
Gene description
nuclear transcription factor Y subunit gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111357.1 (2666410..2752022, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558721.1 (2666410..2737850, complement)

NW_022111357.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA44 Neighboring gene potassium voltage-gated channel subfamily Q member 4 Neighboring gene H/ACA ribonucleoprotein complex subunit 3-like Neighboring gene regulating synaptic membrane exocytosis 3 Neighboring gene 40S ribosomal protein S8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111357.1 Reference ASM31398v2 Primary Assembly

    Range
    2666410..2752022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045298877.1 → XP_045154812.1  nuclear transcription factor Y subunit gamma isoform X2

    Conserved Domains (1) summary
    COG5208
    Location:17 → 123
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  2. XM_045298879.1 → XP_045154814.1  nuclear transcription factor Y subunit gamma isoform X2

    Conserved Domains (1) summary
    COG5208
    Location:17 → 123
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  3. XM_045298875.1 → XP_045154810.1  nuclear transcription factor Y subunit gamma isoform X2

    Conserved Domains (1) summary
    COG5208
    Location:17 → 123
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  4. XM_045298878.1 → XP_045154813.1  nuclear transcription factor Y subunit gamma isoform X2

    Conserved Domains (1) summary
    COG5208
    Location:17 → 123
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  5. XM_045298876.1 → XP_045154811.1  nuclear transcription factor Y subunit gamma isoform X2

    Conserved Domains (1) summary
    COG5208
    Location:17 → 123
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  6. XM_004704930.3 → XP_004704987.2  nuclear transcription factor Y subunit gamma isoform X1

Nucleotide Protein
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