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SLC27A2 solute carrier family 27 member 2 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101659329, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A2
Gene description
solute carrier family 27 member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103905.1 (8553091..8619779)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558738.1 (8553148..8619488)

NW_022103905.1Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 8B4 (putative) Neighboring gene U6 spliceosomal RNA Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene histidine decarboxylase Neighboring gene GA binding protein transcription factor subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phytanate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pristanate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very long-chain acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103905.1 Reference ASM31398v2 Primary Assembly

    Range
    8553091..8619779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045286466.1 → XP_045142401.1  very long-chain acyl-CoA synthetase

Nucleotide Protein
Heading Accession and Version

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