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CCN3 cellular communication network factor 3 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101658096, updated on 8-Mar-2024

Summary

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Gene symbol
CCN3
Gene description
cellular communication network factor 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Also known as
NOV
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103896.1 (19967593..19978752, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558703.1 (19969017..19978492, complement)

NW_022103896.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 2 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 2 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene ATP synthase subunit f, mitochondrial-like Neighboring gene collectin subfamily member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 3
Names
nephroblastoma overexpressed
protein NOV homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103896.1 Reference ASM31398v2 Primary Assembly

    Range
    19967593..19978752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004697668.2 → XP_004697725.1  CCN family member 3

    Conserved Domains (3) summary
    smart00041
    Location:270 → 339
    CT; C-terminal cystine knot-like domain (CTCK)
    smart00214
    Location:111 → 171
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:35 → 90
    IGFBP; Insulin-like growth factor binding protein
Nucleotide Protein
Heading Accession and Version

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