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PLCL2 phospholipase C like 2 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101650434, updated on 8-Mar-2024

Summary

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Gene symbol
PLCL2
Gene description
phospholipase C like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111320.1 (42639583..42839710, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558718.1 (7618187..7818301)

NW_022111320.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene TBC1 domain family member 5 Neighboring gene 60S ribosomal protein L31-like Neighboring gene translationally-controlled tumor protein-like Neighboring gene protein lifeguard 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol 1,4,5 trisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic transmission, GABAergic IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive phospholipase C-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111320.1 Reference ASM31398v2 Primary Assembly

    Range
    42639583..42839710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004704015.2 → XP_004704072.1  inactive phospholipase C-like protein 2 isoform X1

    Conserved Domains (4) summary
    cd00275
    Location:628 → 756
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:299 → 596
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:17 → 125
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd16223
    Location:145 → 288
    EFh_PRIP2; EF-hand motif found in phospholipase C-related but catalytically inactive protein 2 (PRIP-2)

  2. XM_045297441.1 → XP_045153376.1  inactive phospholipase C-like protein 2 isoform X3

  3. XM_045297440.1 → XP_045153375.1  inactive phospholipase C-like protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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