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SNCAIP synuclein alpha interacting protein [ Condylura cristata (star-nosed mole) ]

Gene ID: 101633794, updated on 8-Mar-2024

Summary

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Gene symbol
SNCAIP
Gene description
synuclein alpha interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Condylura cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
Orthologs
human mouse all
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Genomic context

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See SNCAIP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567122.1 (16696111..16765248)

NW_004567122.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase Neighboring gene zinc finger protein 474 Neighboring gene uncharacterized LOC105853914 Neighboring gene sorting nexin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004567122.1 Unplaced Scaffold Reference ConCri1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: synphilin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ConCri1.0

Genomic

  1. NW_004567122.1 Reference ConCri1.0

    Range
    16696111..16765248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004686659.2 → XP_004686716.1  LOW QUALITY PROTEIN: synphilin-1

    Conserved Domains (4) summary
    cd00204
    Location:425 → 559
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:399 → 499
    Ank_2; Ankyrin repeats (3 copies)
    pfam16700
    Location:561 → 604
    SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
    sd00045
    Location:399 → 427
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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