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Gpt glutamic--pyruvic transaminase [ Octodon degus (degu) ]

Gene ID: 101571260, updated on 8-Mar-2024

Summary

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Gene symbol
Gpt
Gene description
glutamic--pyruvic transaminase
See related
Ensembl:ENSODEG00000013205
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524680.1 (3012638..3017145, complement)

NW_004524680.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 14 Neighboring gene RecQ like helicase 4 Neighboring gene major facilitator superfamily domain containing 3 Neighboring gene protein phosphatase 1 regulatory subunit 16A Neighboring gene forkhead box H1 Neighboring gene kinesin family member C2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524680 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524680.1 Reference OctDeg1.0 Primary Assembly

    Range
    3012638..3017145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023723856.1 → XP_023579624.1  alanine aminotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6F5S1
    Conserved Domains (1) summary
    cl27741
    Location:41 → 518
    Aminotran_1_2; Aminotransferase class I and II

  2. XM_004638865.2 → XP_004638922.1  alanine aminotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P3FJG1
    Related
    ENSODEP00000017908.1, ENSODET00000018135.1
    Conserved Domains (2) summary
    cd00609
    Location:98 → 484
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:19 → 496
    PTZ00377; alanine aminotransferase; Provisional
Nucleotide Protein
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