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TPR translocated promoter region, nuclear basket protein [ Sorex araneus (European shrew) ]

Gene ID: 101544270, updated on 8-Mar-2024

Summary

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Gene symbol
TPR
Gene description
translocated promoter region, nuclear basket protein
See related
EnsemblRapid:ENSSARG00000029516
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See TPR in Genome Data Viewer
Location:
chromosome: X
Exon count:
54
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (167813523..167857907, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545922.1 (1539352..1573328)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene influenza virus NS1A binding protein Neighboring gene hemicentin 1 Neighboring gene proteoglycan 4 Neighboring gene odr-4 GPCR localization factor homolog Neighboring gene phosducin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoprotein TPR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    167813523..167857907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055120578.1 → XP_054976553.1  nucleoprotein TPR isoform X3

  2. XM_055120577.1 → XP_054976552.1  nucleoprotein TPR isoform X2

  3. XM_055120576.1 → XP_054976551.1  nucleoprotein TPR isoform X1

    Related
    ENSSARP00000027291.1, ENSSART00000038665.1

  4. XM_055120579.1 → XP_054976554.1  nucleoprotein TPR isoform X4

    Related
    ENSSARP00000036222.1, ENSSART00000024082.1

  5. XM_055120580.1 → XP_054976555.1  nucleoprotein TPR isoform X5

Nucleotide Protein
Heading Accession and Version

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