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LOC101406235 FUS RNA binding protein [ Ceratotherium simum simum (southern white rhinoceros) ]

Gene ID: 101406235, updated on 8-Mar-2024

Summary

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Gene symbol
LOC101406235
Gene description
FUS RNA binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratotherium simum simum (sub-species: simum)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium
Also known as
FUS
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current CerSimSim1.0 (GCF_000283155.1) Unplaced Scaffold NW_004454235.1 (3988342..3999163)

NW_004454235.1Genomic Context describing neighboring genes Neighboring gene lysine acetyltransferase 8 Neighboring gene serine protease 8 Neighboring gene serine protease 36 Neighboring gene apoptosis-associated speck-like protein containing a CARD Neighboring gene tripartite motif containing 72

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004454235.1 Unplaced Scaffold Reference CerSimSim1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein FUS
Names
fused in sarcoma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratotherium simum simum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CerSimSim1.0 Primary Assembly

Genomic

  1. NW_004454235.1 Reference CerSimSim1.0 Primary Assembly

    Range
    3988342..3999163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004439466.2 → XP_004439523.1  RNA-binding protein FUS isoform X1

    Conserved Domains (4) summary
    COG0724
    Location:256 → 366
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12535
    Location:275 → 360
    RRM_FUS_TAF15; RNA recognition motif in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    sd00029
    Location:418 → 439
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:414 → 441
    zf-RanBP; Zn-finger in Ran binding protein and others

  2. XM_014794561.1 → XP_014650047.1  RNA-binding protein FUS isoform X2

    Conserved Domains (4) summary
    COG0724
    Location:255 → 365
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12535
    Location:274 → 359
    RRM_FUS_TAF15; RNA recognition motif in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    sd00029
    Location:417 → 438
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:413 → 440
    zf-RanBP; Zn-finger in Ran binding protein and others
Nucleotide Protein
Heading Accession and Version

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