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LRWD1 leucine rich repeats and WD repeat domain containing 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101381166, updated on 8-Mar-2024

Summary

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Gene symbol
LRWD1
Gene description
leucine rich repeats and WD repeat domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450356.1 (1647950..1653820)

NW_004450356.1Genomic Context describing neighboring genes Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene RNA polymerase II subunit J Neighboring gene ras GTPase-activating protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450356.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of protein localization to chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear origin of replication recognition complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and WD repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450356.1 Reference Oros_1.0 Primary Assembly

    Range
    1647950..1653820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004399136.1 → XP_004399193.1  leucine-rich repeat and WD repeat-containing protein 1

    UniProtKB/TrEMBL
    A0A2U3VUX1
    Conserved Domains (7) summary
    COG2319
    Location:311 → 588
    WD40; WD40 repeat [General function prediction only]
    cd00116
    Location:22 → 123
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:23 → 48
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:47 → 87
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:22 → 81
    LRR_8; Leucine rich repeat
    sd00039
    Location:345 → 391
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:310 → 479
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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