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PELI1 pellino E3 ubiquitin protein ligase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101378723, updated on 8-Mar-2024

Summary

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Gene symbol
PELI1
Gene description
pellino E3 ubiquitin protein ligase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450333.1 (540247..634667, complement)

NW_004450333.1Genomic Context describing neighboring genes Neighboring gene UDP-glucose pyrophosphorylase 2 Neighboring gene VPS54 subunit of GARP complex Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene galectin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450333.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Toll signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase pellino homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450333.1 Reference Oros_1.0 Primary Assembly

    Range
    540247..634667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004397477.1 → XP_004397534.1  E3 ubiquitin-protein ligase pellino homolog 1

    See identical proteins and their annotated locations for XP_004397534.1

    UniProtKB/TrEMBL
    A0A2U3ZCX0
    Conserved Domains (1) summary
    pfam04710
    Location:10 → 418
    Pellino

  2. XM_012561384.1 → XP_012416838.1  E3 ubiquitin-protein ligase pellino homolog 1

    See identical proteins and their annotated locations for XP_012416838.1

    UniProtKB/TrEMBL
    A0A2U3ZCX0
    Conserved Domains (1) summary
    pfam04710
    Location:10 → 418
    Pellino
Nucleotide Protein
Heading Accession and Version

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