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SDE2 SDE2 telomere maintenance homolog [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101369972, updated on 8-Mar-2024

Summary

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Gene symbol
SDE2
Gene description
SDE2 telomere maintenance homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450281.1 (2943585..2957795, complement)

NW_004450281.1Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase 2 Neighboring gene left-right determination factor 2 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene acyl-CoA binding domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450281.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SDE2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450281.1 Reference Oros_1.0 Primary Assembly

    Range
    2943585..2957795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004393544.2 → XP_004393601.2  protein SDE2 homolog

    UniProtKB/TrEMBL
    A0A2U3VFT4
    Conserved Domains (2) summary
    pfam13297
    Location:414 → 473
    Telomere_Sde2_2; Telomere stability C-terminal
    cl00155
    Location:103 → 180
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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