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THOP1 thimet oligopeptidase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101362401, updated on 8-Mar-2024

Summary

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Gene symbol
THOP1
Gene description
thimet oligopeptidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450304.1 (3212658..3232181, complement)

NW_004450304.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 555 Neighboring gene zinc finger protein 554 Neighboring gene small glutamine rich tetratricopeptide repeat co-chaperone alpha Neighboring gene solute carrier family 39 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450304.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thimet oligopeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450304.1 Reference Oros_1.0 Primary Assembly

    Range
    3212658..3232181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004395373.1 → XP_004395430.1  thimet oligopeptidase

    UniProtKB/TrEMBL
    A0A2U3VKI4
    Conserved Domains (2) summary
    cd06455
    Location:35 → 675
    M3A_TOP; Peptidase M3 Thimet oligopeptidase (TOP) also includes neurolysin
    COG0339
    Location:39 → 679
    Dcp; Zn-dependent oligopeptidase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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