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RBM26 RNA binding motif protein 26 [ Orcinus orca (killer whale) ]

Gene ID: 101281350, updated on 8-Mar-2024

Summary

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Gene symbol
RBM26
Gene description
RNA binding motif protein 26
See related
EnsemblRapid:ENSOORG00010003200
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 18 NC_064576.1 (26264747..26353754)

Chromosome 18 - NC_064576.1Genomic Context describing neighboring genes Neighboring gene Nedd4 family interacting protein 2 Neighboring gene uncharacterized LOC125961896 Neighboring gene U6 spliceosomal RNA Neighboring gene ORC ubiquitin ligase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064576.1 Chromosome 18 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 26

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064576.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    26264747..26353754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049700967.1 → XP_049556924.1  RNA-binding protein 26 isoform X4

  2. XM_049700969.1 → XP_049556926.1  RNA-binding protein 26 isoform X10

    Related
    ENSOORP00010003476.1, ENSOORT00010004493.1

  3. XM_049700968.1 → XP_049556925.1  RNA-binding protein 26 isoform X5

  4. XM_033400105.2 → XP_033255996.1  RNA-binding protein 26 isoform X9

    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:737 → 859
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:901 → 972
    RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:546 → 621
    RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 76
    PWI; PWI domain

  5. XM_033400101.2 → XP_033255992.1  RNA-binding protein 26 isoform X6

    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:737 → 859
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:901 → 972
    RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:546 → 621
    RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 76
    PWI; PWI domain

  6. XM_033400102.2 → XP_033255993.1  RNA-binding protein 26 isoform X7

    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:737 → 859
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:901 → 972
    RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:546 → 621
    RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 76
    PWI; PWI domain

  7. XM_033400100.2 → XP_033255991.1  RNA-binding protein 26 isoform X1

    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:737 → 859
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:901 → 972
    RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:546 → 621
    RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 76
    PWI; PWI domain

  8. XM_049700963.1 → XP_049556920.1  RNA-binding protein 26 isoform X1

  9. XM_049700962.1 → XP_049556919.1  RNA-binding protein 26 isoform X1

  10. XM_049700965.1 → XP_049556922.1  RNA-binding protein 26 isoform X1

  11. XM_033400103.2 → XP_033255994.1  RNA-binding protein 26 isoform X8

    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:713 → 835
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:877 → 948
    RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:546 → 621
    RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 76
    PWI; PWI domain

  12. XM_004276836.4 → XP_004276884.1  RNA-binding protein 26 isoform X3

    Related
    ENSOORP00010003475.1, ENSOORT00010004492.1
    Conserved Domains (5) summary
    smart00356
    Location:294 → 314
    ZnF_C3H1; zinc finger
    COG0419
    Location:727 → 849
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd12258
    Location:891 → 962
    RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
    cd12516
    Location:536 → 611
    RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
    cl02562
    Location:11 → 74
    PWI; PWI domain

  13. XM_049700966.1 → XP_049556923.1  RNA-binding protein 26 isoform X2

Nucleotide Protein
Heading Accession and Version

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