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BECN1 beclin 1 [ Felis catus (domestic cat) ]

Gene ID: 101101015, updated on 17-Aug-2024

Summary

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Official Symbol
BECN1
Official Full Name
beclin 1
Primary source
VGNC:VGNC:60099
See related
EnsemblRapid:ENSFCTG00005010175
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E1
Exon count:
13
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (41339123..41352251, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (43316051..43329131, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene WNK lysine deficient protein kinase 4 Neighboring gene cytochrome c oxidase assembly factor 3 Neighboring gene cyclin N-terminal domain containing 1 Neighboring gene proteasome activator subunit 3 Neighboring gene amine oxidase copper containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beclin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    41339123..41352251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003996906.6 → XP_003996955.1  beclin-1 isoform X2

    See identical proteins and their annotated locations for XP_003996955.1

    UniProtKB/TrEMBL
    M3WIA5
    Related
    ENSFCTP00005018532.1, ENSFCTT00005028444.1
    Conserved Domains (3) summary
    pfam15285
    Location:105 → 127
    BH3; Beclin-1 BH3 domain, Bcl-2-interacting
    pfam04111
    Location:265 → 443
    APG6; Autophagy protein Apg6
    pfam17675
    Location:133 → 259
    APG6_N; Apg6 coiled-coil region

  2. XM_019817925.3 → XP_019673484.1  beclin-1 isoform X1

    Related
    ENSFCTP00005018510.1, ENSFCTT00005028414.1
    Conserved Domains (3) summary
    pfam15285
    Location:128 → 150
    BH3; Beclin-1 BH3 domain, Bcl-2-interacting
    pfam04111
    Location:288 → 466
    APG6; Autophagy protein Apg6
    pfam17675
    Location:156 → 282
    APG6_N; Apg6 coiled-coil region

  3. XM_045045002.1 → XP_044900937.1  beclin-1 isoform X3

    Conserved Domains (2) summary
    COG1196
    Location:91 → 212
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15285
    Location:53 → 75
    BH3; Beclin-1 BH3 domain, Bcl-2-interacting
Nucleotide Protein
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