U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIM62 tripartite motif containing 62 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101036674, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIM62
Gene description
tripartite motif containing 62
See related
EnsemblRapid:ENSSBOG00000035058
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100927.1 (55825302..55860418)

NW_024100927.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120366088 Neighboring gene zinc finger protein 362 Neighboring gene synaptojanin-2-binding protein-like Neighboring gene antizyme inhibitor 2 Neighboring gene adenylate kinase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024100927 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase TRIM62

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100927.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    55825302..55860418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010348115.2 → XP_010346417.2  E3 ubiquitin-protein ligase TRIM62

    Related
    ENSSBOP00000037958.2, ENSSBOT00000054903.2
    Conserved Domains (4) summary
    COG1196
    Location:133 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd13744
    Location:284 → 471
    SPRY_PRY_TRIM62; PRY/SPRY domain in tripartite motif-binding protein 62 (TRIM62)
    cd16608
    Location:6 → 55
    RING-HC_TRIM62_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 62 (TRIM62) and similar proteins
    cd19792
    Location:91 → 128
    Bbox2_TRIM62_C-IV; B-box-type 2 zinc finger found in tripartite motif-containing protein 62 (TRIM62) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.