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KRR1 KRR1 small subunit processome component homolog [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101028607, updated on 8-Mar-2024

Summary

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Gene symbol
KRR1
Gene description
KRR1 small subunit processome component homolog
See related
EnsemblRapid:ENSSBOG00000029569
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100924.1 (56649443..56661090)

NW_024100924.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating-like Neighboring gene GLI pathogenesis related 1 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100924 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KRR1 small subunit processome component homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100924.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    56649443..56661090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003927815.3 → XP_003927864.2  KRR1 small subunit processome component homolog isoform X1

    UniProtKB/TrEMBL
    A0A2K6U2W5
    Related
    ENSSBOP00000026243.2, ENSSBOT00000043116.2
    Conserved Domains (2) summary
    cd22393
    Location:54 → 136
    KH-I_KRR1_rpt1; first type I K homology (KH) RNA-binding domain found in KRR1 small subunit processome component and similar proteins
    cd22394
    Location:140 → 231
    KH-I_KRR1_rpt2; second type I K homology (KH) RNA-binding domain found in KRR1 small subunit processome component and similar proteins

  2. XM_010338444.2 → XP_010336746.2  KRR1 small subunit processome component homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K6U2W5
    Related
    ENSSBOP00000040800.1, ENSSBOT00000062707.1
    Conserved Domains (2) summary
    cd22393
    Location:54 → 136
    KH-I_KRR1_rpt1; first type I K homology (KH) RNA-binding domain found in KRR1 small subunit processome component and similar proteins
    cd22394
    Location:140 → 203
    KH-I_KRR1_rpt2; second type I K homology (KH) RNA-binding domain found in KRR1 small subunit processome component and similar proteins
Nucleotide Protein
Heading Accession and Version

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