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NOCT nocturnin [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100979611, updated on 8-Mar-2024

Summary

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Gene symbol
NOCT
Gene description
nocturnin
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CCRN4L
Orthologs
human mouse all
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Genomic context

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See NOCT in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (136888311..136920335)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (137280657..137312673)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene armadillo repeat-containing protein 1-like Neighboring gene RNA-binding protein NOB1-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase 1 regulatory subunit 14B-like Neighboring gene E74 like ETS transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian rhythm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nocturnin
Names
CCR4 carbon catabolite repression 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    136888311..136920335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034959159.3 → XP_034815050.1  nocturnin

    UniProtKB/TrEMBL
    A0A2R9CEL3
    Conserved Domains (1) summary
    cd09096
    Location:144 → 423
    Deadenylase_nocturnin; C-terminal deadenylase domain of nocturnin and related domains
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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