U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MKRN2 makorin ring finger protein 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100973245, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MKRN2
Gene description
makorin ring finger protein 2
See related
Ensembl:ENSPPAG00000036523
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 2 NC_085926.1 (12541577..12570539)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 3 NC_073252.1 (12546338..12574276)

Chromosome 2 - NC_085926.1Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator activated receptor gamma Neighboring gene U6 spliceosomal RNA Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene MKRN2 opposite strand Neighboring gene small nucleolar RNA U13 Neighboring gene Raf-1 proto-oncogene, serine/threonine kinase Neighboring gene transmembrane protein 40

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase makorin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_085926.1 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    12541577..12570539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003826255.6 → XP_003826303.1  E3 ubiquitin-protein ligase makorin-2 isoform X1

    See identical proteins and their annotated locations for XP_003826303.1

    UniProtKB/TrEMBL
    A0A2R9BF16, A0A2R9BJC4
    Related
    ENSPPAP00000026891.1
    Conserved Domains (4) summary
    COG5084
    Location:6 → 63
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
    cd16731
    Location:235 → 292
    RING-HC_MKRN2; RING finger, HC subclass, found in makorin-2 (MKRN2) and similar proteins
    cl25637
    Location:300 → 392
    DFRP_C; DRG Family Regulatory Proteins, Tma46
    cl27165
    Location:178 → 327
    PHA02929; N1R/p28-like protein; Provisional

  2. XM_014344168.4 → XP_014199654.1  E3 ubiquitin-protein ligase makorin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BCM9, A0A2R9BJC4
    Related
    ENSPPAP00000026892.1
    Conserved Domains (3) summary
    cd16731
    Location:192 → 249
    RING-HC_MKRN2; RING finger, HC subclass, found in makorin-2 (MKRN2) and similar proteins
    cl25637
    Location:257 → 349
    DFRP_C; DRG Family Regulatory Proteins, Tma46
    cl27165
    Location:135 → 284
    PHA02929; N1R/p28-like protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials