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ZNF280D zinc finger protein 280D [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100972559, updated on 6-Jun-2024

Summary

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Gene symbol
ZNF280D
Gene description
zinc finger protein 280D
See related
Ensembl:ENSPPAG00000034034
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ZNF280D in Genome Data Viewer
Location:
chromosome: 16
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 16 NC_073265.2 (45891190..46088200, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 15 NC_073264.1 (50074168..50177045, complement)

Chromosome 16 - NC_073265.2Genomic Context describing neighboring genes Neighboring gene testis expressed 9 Neighboring gene uncharacterized LOC117976031 Neighboring gene meiosis specific nuclear structural 1 Neighboring gene acyl-CoA-binding domain-containing protein 7-like Neighboring gene uncharacterized LOC129394065

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 280D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073265.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    45891190..46088200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063596668.1 → XP_063452738.1  zinc finger protein 280D isoform X2

    UniProtKB/TrEMBL
    A0A2R9AWV5

  2. XM_063596672.1 → XP_063452742.1  zinc finger protein 280D isoform X3

    UniProtKB/TrEMBL
    A0A2R9AWV5

  3. XM_034938820.3 → XP_034794711.1  zinc finger protein 280D isoform X3

    UniProtKB/TrEMBL
    A0A2R9AWV5
    Conserved Domains (2) summary
    sd00017
    Location:347 → 368
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:32 → 215
    DUF4195; Domain of unknown function (DUF4195)

  4. XM_034938816.3 → XP_034794707.2  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A2R9AWV5

  5. XM_034938817.3 → XP_034794708.1  zinc finger protein 280D isoform X2

    UniProtKB/TrEMBL
    A0A2R9AWV5
    Conserved Domains (2) summary
    sd00017
    Location:360 → 381
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:45 → 228
    DUF4195; Domain of unknown function (DUF4195)

  6. XM_034938819.3 → XP_034794710.1  zinc finger protein 280D isoform X2

    UniProtKB/TrEMBL
    A0A2R9AWV5
    Conserved Domains (2) summary
    sd00017
    Location:360 → 381
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:45 → 228
    DUF4195; Domain of unknown function (DUF4195)

  7. XM_008953197.5 → XP_008951445.1  zinc finger protein 280D isoform X2

    See identical proteins and their annotated locations for XP_008951445.1

    UniProtKB/TrEMBL
    A0A2R9AWV5
    Conserved Domains (2) summary
    sd00017
    Location:360 → 381
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:45 → 228
    DUF4195; Domain of unknown function (DUF4195)

  8. XM_063596669.1 → XP_063452739.1  zinc finger protein 280D isoform X2

    UniProtKB/TrEMBL
    A0A2R9AWV5

  9. XM_063596673.1 → XP_063452743.1  zinc finger protein 280D isoform X4

    UniProtKB/TrEMBL
    A0A2R9AWV5

  10. XM_063596671.1 → XP_063452741.1  zinc finger protein 280D isoform X3

    UniProtKB/TrEMBL
    A0A2R9AWV5

  11. XM_063596670.1 → XP_063452740.1  zinc finger protein 280D isoform X3

    UniProtKB/TrEMBL
    A0A2R9AWV5

  12. XM_034938821.3 → XP_034794712.1  zinc finger protein 280D isoform X4

    UniProtKB/TrEMBL
    A0A2R9AWV5
    Conserved Domains (2) summary
    sd00017
    Location:254 → 275
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:14 → 122
    DUF4195; Domain of unknown function (DUF4195)

  13. XM_063596674.1 → XP_063452744.1  zinc finger protein 280D isoform X6

  14. XM_055099059.2 → XP_054955034.1  zinc finger protein 280D isoform X5

Nucleotide Protein
Heading Accession and Version

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